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Trans-eQTLs across different cancer types

In trans-eQTL analysis, we identified 231,210 eQTL−gene pairs at FDR < 0.05 in 33 cancer types for users to search or browse.

     

e.g., "PRAD"
e.g., "rs7231881"
e.g., "SMAD4"


     

Cancer type
SNP ID
SNP position (hg19)
Alleles (A/a)
Gene symbol
Gene position (hg19)
Beta
t-stat
p-valule
Display
THCA rs4145987 chr2:132269231 G/A CCDC74B chr2:130896860-130902707:- 0.41 7.37 7.57E-13 Box Plot
THCA rs4145988 chr2:132269230 G/C CCDC74B chr2:130896860-130902707:- 0.41 7.32 1.07E-12 Box Plot
THCA rs4147028 chr2:101143078 C/G LOC285359 chr3:101431278-101432259:+ -0.36 -6.26 8.55E-10 Box Plot
THCA rs415430 chr17:44859144 C/T C17orf69 chr17:43716341-43723594:+ -0.53 -11.73 4.37E-28 Box Plot
THCA rs415430 chr17:44859144 C/T LOC644172 chr17:43677491-43679748:- -1.11 -19.15 4.6E-61 Box Plot
THCA rs415430 chr17:44859144 C/T LRRC37A4 chr17:43578685-43595516:- 0.69 16.75 7.32E-50 Box Plot
THCA rs415430 chr17:44859144 C/T MGC57346 chr17:43697712-43715327:+ -0.49 -9.38 2.71E-19 Box Plot
THCA rs415430 chr17:44859144 C/T PLEKHM1 chr17:43513266-43568115:- -0.33 -6.7 5.91E-11 Box Plot
THCA rs4178 chr8:11701887 CTG/C SGK223 chr8:8175258-8244008:- -0.39 -6.29 7.08E-10 Box Plot
THCA rs418913 chr22:22365205 A/G C22orf30 chr22:32072242-32146120:- -0.42 -6.03 3.29E-9 Box Plot
THCA rs418913 chr22:22365205 A/G CBY1 chr22:39052641-39069859:+ -0.48 -5.9 6.78E-9 Box Plot
THCA rs418913 chr22:22365205 A/G GGA1 chr22:38004482-38029571:+ -0.59 -6.9 1.66E-11 Box Plot
THCA rs418913 chr22:22365205 A/G RNF215 chr22:30764800-30817760:- -0.51 -5.97 4.7E-9 Box Plot
THCA rs418913 chr22:22365205 A/G RPS19BP1 chr22:39925098-39928860:- -0.42 -6.38 4.21E-10 Box Plot
THCA rs418913 chr22:22365205 A/G SFI1 chr22:31884674-32014572:+ -0.5 -6.36 4.66E-10 Box Plot